PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.J3ZJD
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 338aa    MW: 38166.6 Da    PI: 7.2921
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.J3ZJDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12162209355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + h ++Er+RR+++ ++f  L  l+P +     +K +Ka++L  A++Y+k+Lq
  Araip.J3ZJD 162 QDHIIAERKRREKLSQRFIALSALVPGL-----QKTDKASVLGDAIKYLKQLQ 209
                  5799***********************9.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.12159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.42E-17163222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-17163222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-10163209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.25E-12164213No hitNo description
SMARTSM003538.7E-15165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDISSLRGLT DLEIMEDPTY LHQWHLSSID EPTLLPIAAA FGETLQQHSF SHPSFNPKTS  60
METSLSNIDR PTKHLKNNSW CPTKTPSEAQ FASCSTLLSF VDPNYINQLE VVKSKDEMVC  120
PKMNDTTPKD MNFQGTLGNQ YVFEASQATK HVGPRSRLSQ PQDHIIAERK RREKLSQRFI  180
ALSALVPGLQ KTDKASVLGD AIKYLKQLQE KVKALEEEQN KRKAVESVVF VKKSQLSNDA  240
EDASLEYEGI FHEALPEIEA RFCDKNVLIR IHCEKNRGVV EKSINQIEKL HLKVTNSSAM  300
TFGSWALDIT IIAQMEKGFC MTVKELVRNL RSAFASII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172ERKRRE
2168173RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016184593.10.0PREDICTED: transcription factor bHLH25-like
TrEMBLA0A0S3QZU51e-159A0A0S3QZU5_PHAAN; Uncharacterized protein
STRINGGLYMA15G06680.11e-152(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-63bHLH family protein